BIROn - Birkbeck Institutional Research Online

    Metabolic innovations towards the human lineage

    Freilich, S. and Goldovsky, L. and Ouzounis, C.A. and Thornton, Janet M. (2008) Metabolic innovations towards the human lineage. BMC Evolutionary Biology 8 (247), ISSN 1471-2148.

    Full text not available from this repository.

    Abstract

    Background: We describe a function-driven approach to the analysis of metabolism which takes into account the phylogenetic origin of biochemical reactions to reveal subtle lineage-specific metabolic innovations, undetectable by more traditional methods based on sequence comparison. The origins of reactions and thus entire pathways are inferred using a simple taxonomic classification scheme that describes the evolutionary course of events towards the lineage of interest. We investigate the evolutionary history of the human metabolic network extracted from a metabolic database, construct a network of interconnected pathways and classify this network according to the taxonomic categories representing eukaryotes, metazoa and vertebrates. Results: It is demonstrated that lineage-specific innovations correspond to reactions and pathways associated with key phenotypic changes during evolution, such as the emergence of cellular organelles in eukaryotes, cell adhesion cascades in metazoa and the biosynthesis of complex cell-specific biomolecules in vertebrates. Conclusion: This phylogenetic view of metabolic networks puts gene innovations within an evolutionary context, demonstrating how the emergence of a phenotype in a lineage provides a platform for the development of specialized traits.

    Metadata

    Item Type: Article
    School: Birkbeck Schools and Departments > School of Science > Biological Sciences
    Depositing User: Administrator
    Date Deposited: 04 Aug 2010 14:09
    Last Modified: 17 Apr 2013 12:17
    URI: http://eprints.bbk.ac.uk/id/eprint/1105

    Statistics

    Downloads
    Activity Overview
    0Downloads
    75Hits

    Additional statistics are available via IRStats2.

    Archive Staff Only (login required)

    Edit/View Item Edit/View Item