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    PoreLogo: a new tool to analyse, visualize and compare channels in transmembrane proteins

    Oliva, R. and Thornton, Janet M. and Pellegrini-Calace, M. (2009) PoreLogo: a new tool to analyse, visualize and compare channels in transmembrane proteins. Bioinformatics 25 (23), pp. 3183-3184. ISSN 1367-4811.

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    Abstract

    The increasing number of available atomic 3D structures of transmembrane channel proteins represents a valuable resource for better understanding their structure–function relationships and to eventually predict their selectivity. Herein, we present PoreLogo, an automatic tool for analysing, visualizing and comparing the amino acid composition of transmembrane channels and its conservation across the corresponding protein family.

    Metadata

    Item Type: Article
    School: Birkbeck Schools and Departments > School of Science > Biological Sciences
    Depositing User: Administrator
    Date Deposited: 04 Aug 2010 14:09
    Last Modified: 17 Apr 2013 12:17
    URI: http://eprints.bbk.ac.uk/id/eprint/1116

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