2011

Abdul-Gader, Ali and Miles, Andrew J. and Wallace, Bonnie A. (2011) A reference dataset for the analyses of membrane protein secondary structures and transmembrane residuesusing circular dichroism spectroscopy. Bioinformatics 27 (12), pp. 1630-1636. ISSN 1367-4803.

Beck, M. and Topf, Maya and Frazier, Z. and Tjong, H. and Xu, M. and Zhang, S.H. and Alber, F. (2011) Exploring the spatial and temporal organization of a cell's proteome. Journal of Structural Biology 173 (3), pp. 483-496. ISSN 1047-8477.

Charalambous, Kalypso and Wallace, Bonnie A. (2011) NaChBac: the long lost sodium channel ancestor. Biochemistry 50 (32), pp. 6742-6752. ISSN 0006-2960.

Lees, William D. and Moss, David S. and Shepherd, Adrian J. (2011) Analysis of antigenically important residues in human influenza A virus in terms of B-cell epitopes. Journal of Virology 85 (17), pp. 8548-8555. ISSN 0022-538X.

Patschull, Anathe O.M. and Segu, Lakshmi and Nyon, Mun Peak and Lomas, D.A. and Nobeli, Irene and Barrett, Tracey E. and Gooptu, Bibek (2011) Therapeutic target-site variability in α1-antitrypsin characterized at high resolution. Acta Crystallographica Section F Structural Biology and Crystallization Communications 67 (12), pp. 1492-1497. ISSN 1744-3091.

Whitmore, Lee and Woollett, Benjamin and Miles, Andrew J. and Klose, D.P. and Janes, R.W. and Wallace, Bonnie A. (2011) PCDDB: the protein circular dichroism data bank, a repository for circular dichroism spectral and metadata. Nucleic Acids Research 39 (S1), D480-D486. ISSN 0305-1048.

January 2011

Deoni, S.C.L. and Mercure, Evelyne and Blasi, Anna and Gasston, D. and Thomson, A. and Johnson, Mark H. and Williams, S.C.R. and Murphy, D.G.M. (2011) Mapping infant brain myelination with magnetic resonance imaging. Journal of Neuroscience 31 (2), pp. 784-791. ISSN 0270-6474.

Henderson, B. and Nair, S.P. and Pallas, J. and Williams, Mark A. (2011) Fibronectin: a multidomain host adhesin targeted by bacterial fibronectin-binding proteins. FEMS Microbiology Reviews 35 (1), pp. 147-200. ISSN 1574-6976.

Whitmore, Lee and Woollett, Benjamin and Miles, Andrew J. and Klose, D.P. and Janes, R.W. and Wallace, Bonnie A. (2011) PCDDB: the Protein Circular Dichroism Data Bank, a repository for circular dichroism spectral and metadata. Nucleic Acids Research 39 (1), D480-D486. ISSN 0305-1048.

12 January 2011

Yuan, Shujun and Yu, Xinchao and Topf, Maya and Dorstyn, Loretta and Kumar, Sharad and Ludtke, Steven J. and Akey, C.W. (2011) Structure of the Drosophila Apoptosome at 6.9 Å Resolution. Structure 19 (1), pp. 128-140. ISSN 09692126.

10 February 2011

da Fonsceca, P.C.A. and Kong, E.H. and Zhang, Z. and Schreiber, A. and Williams, Mark A. and Morris, E.P. and Barford, D. (2011) Structures of APC/C-CDH1 with substrates identify Cdh1 and Apc10 as the D-box co-receptor. Nature 470 , pp. 274-278. ISSN 0028-0836.

11 February 2011

Edwards, M.J. and Williams, Mark A. and Maxwell, A. and McKay, A.R. (2011) Mass spectrometry reveals that the antibiotic simocyclinone D8 binds to DNA gyrase in a "bent-over" conformation: evidence for positive cooperativity in binding. Biochemistry 50 (17), pp. 3432-3440. ISSN 0006-2960.

March 2011

Moore, B. and Miles, Andrew J. and Guerra-Giraldez, C. and Simpson, P. and Iwata, M. and Wallace, Bonnie A. and Matthews, S.J. and Smith, D.F. and Brown, K.A. (2011) Structural basis of molecular recognition of the Leishmania Small Hydrophilic Endoplasmic Reticulum-associated Protein (SHERP) at membrane surfaces. Journal of Biological Chemistry 286 (11), pp. 9246-9256. ISSN 0021-9258.

May 2011

Vasishtan, Daven and Topf, Maya (2011) Scoring functions for cryoEM density fitting. Journal of Structural Biology 174 (2), pp. 333-343. ISSN 1047-8477.

6 May 2011

McCusker, Emily C. and d'Avanzo, N. and Nichols, C.G. and Wallace, Bonnie A. (2011) Simplified bacterial “pore” channel provides insight into the assembly, stability and structure of sodium channels. Journal of Biological Chemistry 286 (18), pp. 16386-16391. ISSN 0021-9258.

18 May 2011

Wilson, M. and Wei, C. and Bjelkmar, P. and Wallace, Bonnie A. and Pohorille, A. (2011) Molecular dynamics simulation of the antiamoebin ion channel: linking structure and conductance. Biophysical Journal 100 (10), pp. 2394-2402. ISSN 0006-3495.

June 2011

Beich Frandsen, M. and Vecerek, B. and Konarev, P.V. and Sjoblom, B. and Kloiber, K. and Hammerle, H. and Rajkowitsch, L. and Miles, Andrew J. and Kontaxis, G. and Wallace, Bonnie A. and Svergun, D.I. and Konrat, R. and Blasi, U. and Djinovic Carugo, K. (2011) Structural insights into the dynamics and function of the C-terminus of the E. coli RNA chaperone Hfq. Nucleic Acids Research 39 (11), pp. 4900-4915. ISSN 0305-1048.

July 2011

Papamarkos, G. and Poulovassilis, Alexandra and Wood, Peter T. (2011) Performance modelling of event-condition-action rules in P2P networks. Journal of Computer and System Sciences 77 (4), pp. 621-636. ISSN 0022-0000.

12 July 2011

Platzer, G. and Schedlbauer, A. and Chemelli, A. and Ozdowy, P. and Coudevylle, N. and Auer, R. and Kontaxis, G. and Hartl, M. and Miles, Andrew J. and Wallace, Bonnie A. and Glatter, O. and Bister, K. and Konrat, R. (2011) The metastasis-associated extracellular matrix protein Osteopontin forms transient structure in ligand interaction sites. Biochemistry 50 (27), pp. 6113-6124. ISSN 0006-2960.

26 July 2011

Blasi, Anna and Mercure, Evelyne and Lloyd-Fox, Sarah and Thomson, A. and Brammer, M. and Sauter, Disa and Deeley, Q. and Barker, G.J. and Renvall, V. and Deoni, S.C.L. and Gasston, D. and Williams, S.C.R. and Johnson, Mark H. and Simmons, A. and Murphy, D.G.M. (2011) Early specialization for voice and emotion processing in the infant brain. Current Biology 21 (14), pp. 1220-1224. ISSN 0960-9822.

August 2011

Guzman, Juan D. and Wube, A. and Evangelopoulos, Dimitrios and Gupta, Antima and Hufner, A. and Basavannacharya, Chandrakala and Rahman, M.M. and Thomaschitz, C. and Bauer, R. and McHugh, T.D. and Nobeli, Irene and Prieto, J.M. and Gibbons, S. and Bucar, F. and Bhakta, Sanjib (2011) Interaction of N-methyl-2-alkenyl-4-quinolones with ATP-dependent MurE ligase of Mycobacterium tuberculosis: antibacterial activity, molecular docking and inhibition kinetics. Journal of Antimicrobial Chemotherapy 66 (8), pp. 1766-1772. ISSN 0305-7453.

Whitfield, T. and Miles, Andrew J. and Scheinost, J.C. and Offer, J. and Wentworth, P. and Dwek, R.A. and Wallace, Bonnie A. and Biggin, P.C. and Zitzmann, N. (2011) The influence of different lipid environments on the structure and function of the hepatitis C virus p7 ion channel protein. Molecular Membrane Biology 28 (5), pp. 254-264. ISSN 0968-7688.

2 August 2011

Olsson, T.S.G. and Pitt, W.R. and Ladbury, J.E. and Williams, Mark A. (2011) The extent of enthalpy-entropy compensation in protein-ligand interactions. Protein Science 20 (9), pp. 1607-1618. ISSN 0961-8368.

1 September 2011

Wallace, Bonnie A. and Gekko, K. and Vrønning Hoffmann, S. and Lin, Y.H. and Sutherland, J.C. and Tao, Y. and Wien, F. and Janes, R.W. (2011) Synchrotron radiation circular dichroism (SRCD) spectroscopy: An emerging method in structural biology for examining protein conformations and protein interactions. Nuclear Instruments and Methods in Physics Research Section A: Accelerators, Spectrometers, Detectors and Associated Equipment 649 (1), pp. 177-178. ISSN 0168-9002.

October 2011

Miles, Andrew J. and Wallace, Bonnie A. and Esmann, M. (2011) Correlation of structural and functional thermal stability of the integral membrane protein Na,K-ATPase. Biochimica et Biophysica Acta (BBA) - Biomembranes 1808 (10), pp. 2573-2580. ISSN 0006-3002.

November 2011

Favia, A.D. and Nobeli, Irene (2011) Using chemical structure to infer biological function. In: Guha, R. and Bender, A. (eds.) Computational Approaches in Cheminformatics and Bioinformatics. Hoboken, U.S.: Wiley, pp. 211-238. ISBN 9780470384411.

5 December 2011

Chang, Y.-P. and Mahadeva, R. and Patschull, A.O.M. and Nobeli, Irene and Ekeowa, U.I. and McKay, A.R. and Thalassinos, Konstantinos and Irving, J.A. and Haq, I. and Nyon, Mun Peak and Christodoulou, John and Ordóñez, A. and Miranda, E. and Gooptu, Bibek (2011) Targeting serpins in high-throughput and structure-based drug design. In: Whisstock, J.C. and Bird, P.I. (eds.) Serpin Structure and Evolution. Methods In Enzymology 501. New York, U.S.: Elsevier, pp. 139-175. ISBN 9780123859501.

13 December 2011

Poulovassilis, Alexandra and Selmer, Petra and Wood, Peter T. (2011) Flexible querying of lifelong learner metadata. IEEE Transactions on Learning Technologies 5 (2), pp. 117-129. ISSN 1939-1382.