PoreLogo: a new tool to analyse, visualize and compare channels in transmembrane proteins

Oliva, R. and Thornton, Janet M. and Pellegrini-Calace, M. (2009) PoreLogo: a new tool to analyse, visualize and compare channels in transmembrane proteins. Bioinformatics 25 (23), pp. 3183-3184. ISSN 1367-4811.

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Official URL: http://dx.doi.org/10.1093/bioinformatics/btp545

Abstract

The increasing number of available atomic 3D structures of transmembrane channel proteins represents a valuable resource for better understanding their structure–function relationships and to eventually predict their selectivity. Herein, we present PoreLogo, an automatic tool for analysing, visualizing and comparing the amino acid composition of transmembrane channels and its conservation across the corresponding protein family.

Metadata

Item Type:	Article
School:	Birkbeck Schools and Departments > School of Science > Biological Sciences
Depositing User:	Administrator
Date Deposited:	04 Aug 2010 14:09
Last Modified:	17 Apr 2013 12:17
URI:	http://eprints.bbk.ac.uk/id/eprint/1116

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