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    DichroMatch at the Protein Circular Dichroism Data Bank (DM@PCDDB): a web-based tool for identifying protein nearest neighbors using Circular Dichroism Spectroscopy

    Whitmore, L. and Mavridis, L. and Wallace, Bonnie A. and Janes, R.W. (2018) DichroMatch at the Protein Circular Dichroism Data Bank (DM@PCDDB): a web-based tool for identifying protein nearest neighbors using Circular Dichroism Spectroscopy. Protein Science 27 (1), pp. 10-13. ISSN 0961-8368.

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    Abstract

    Circular dichroism spectroscopy is a well-used, but simple method in structural biology for providing information on the secondary structure and folds of proteins. DichroMatch (DM@PCDDB) is an online tool that is newly available in the Protein Circular Dichroism Data Bank (PCDDB), which takes advantage of the wealth of spectral and metadata deposited therein, to enable identification of spectral nearest neighbours of a query protein based on six different methods of spectral matching. DM@PCDDB can potentially provide novel information about structural relationships between proteins and can be used in comparison studies of protein homologues and orthologues. This article is protected by copyright. All rights reserved.

    Metadata

    Item Type: Article
    Keyword(s) / Subject(s): Tools for Protein Characterisation, Bioinformatics, Circular Dichroism Spectroscopy, Secondary Structure, Folds
    School: Birkbeck Schools and Departments > School of Science > Biological Sciences
    Depositing User: Administrator
    Date Deposited: 14 Jun 2017 09:31
    Last Modified: 21 Nov 2019 08:03
    URI: http://eprints.bbk.ac.uk/id/eprint/18920

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