BIROn - Birkbeck Institutional Research Online

    In situ structure determination by subtomogram averaging

    Castaño-Díez, D. and Zanetti, Giulia (2019) In situ structure determination by subtomogram averaging. Current Opinion in Structural Biology 58 , pp. 68-75. ISSN 0959-440X.

    [img]
    Preview
    Text
    28032.pdf - Published Version of Record
    Available under License Creative Commons Attribution Non-commercial No Derivatives.

    Download (2MB) | Preview

    Abstract

    Cryo-tomography and subtomogram averaging are increasingly popular techniques for structural determination of macromolecular complexes in situ. They have the potential to achieve high-resolution views of native complexes, together with the details of their location relative to interacting molecules. The subtomogram averaging (StA) pipelines are well-established, with current developments aiming to optimise each step by reducing manual intervention and user decisions, following similar trends in single-particle approaches that have dramatically increased their popularity. Here, we review the main steps of typical StA workflows. We focus on considerations arising from the fact that the objects of study are embedded within unique crowded environments, and we emphasise those steps where careful decisions need to be made by the user. [Abstract copyright: Copyright © 2019 The Authors. Published by Elsevier Ltd.. All rights reserved.]

    Metadata

    Item Type: Article
    School: Birkbeck Schools and Departments > School of Science > Biological Sciences
    SWORD Depositor: Mr Joe Tenant
    Depositing User: Mr Joe Tenant
    Date Deposited: 09 Sep 2019 05:51
    Last Modified: 10 Sep 2019 07:44
    URI: http://eprints.bbk.ac.uk/id/eprint/28032

    Statistics

    Downloads
    Activity Overview
    77Downloads
    39Hits

    Additional statistics are available via IRStats2.

    Archive Staff Only (login required)

    Edit/View Item Edit/View Item