Bioinformatics

Coll, F. and Mallard, K. and Preston, M. and Bentley, S. and Parkhill, J. and McNerney, R. and Martin, Nigel and Clark, T. (2012) SpolPred: rapid and accurate prediction of Mycobacterium tuberculosis spoligotypes from short genomic sequences. Bioinformatics 28 (22), pp. 2991-2993. ISSN 1367-4803.

Shepherd, Adrian J. and Martin, Nigel and Johnson, Roger and Kellam, P. and Orengo, C.A. (2002) PFDB: a generic protein family database integrating the CATH domain structure database with sequence based protein family resources. Bioinformatics 18 (12), pp. 1666-1672. ISSN 1367-4803.

Future Generation Computer Systems

Zamboulis, Lucas and Martin, Nigel and Poulovassilis, Alexandra (2010) Query performance evaluation of an architecture for fine-grained integration of heterogeneous grid data sources. Future Generation Computer Systems 26 (8), pp. 1073-1091. ISSN 0167-739X.

Genome Biology

Swift, S. and Tucker, A. and Vinciotti, V. and Martin, Nigel and Orengo, C.A. and Liu, X. and Kellam, P. (2004) Consensus clustering and functional interpretation of gene-expression data. Genome Biology 5 (11), ISSN 1465-6906.

Genome Medicine

Coll, F. and McNerney, R. and Preston, M.D and Guerra-Assunção, J.A. and Warry, A. and Hill-Cawthorne, G. and Mallard, K. and Nair, M. and Miranda, A. and Alves, A. and Perdigão, J. and Viveiros, M. and Portugal, I. and Hasan, Z. and Hasan, R. and Glynn, J.R. and Martin, Nigel and Pain, A. and Clark, T.G (2015) Rapid determination of anti-tuberculosis drug resistance from whole-genome sequences. Genome Medicine 7 (1), ISSN 1756-994X.

Journal of Data and Information Quality

Martin, Nigel and Poulovassilis, Alexandra and Wang, J. (2014) A methodology and architecture embedding quality assessment in data integration. Journal of Data and Information Quality 4 (4), ISSN 1936-1955.

Nature Communications

Coll, F. and McNerney, R. and Guerra-Assunção, J.A. and Glynn, J.R. and Perdigão, J. and Viveiros, M. and Portugal, I. and Pain, A. and Martin, Nigel and Clark, T.G. (2014) A robust SNP barcode for typing Mycobacterium tuberculosis complex strains. Nature Communications 5 , p. 4812. ISSN 2041-1723.

Nucleic Acids Research

Siepen, J.A. and Belhajjame, K. and Selley, J.N. and Embury, S.M. and Paton, N.W. and Goble, C.A. and Oliver, S.G. and Stevens, R. and Zamboulis, Lucas and Martin, Nigel and Poulovassilis, Alexandra and Jones, P. and Côté, R. and Hermjakob, H. and Pentony, M.M. and Jones, D.T. and Orengo, C.A. and Hubbard, S.J. (2008) ISPIDER Central: an integrated database web-server for proteomics. Nucleic Acids Research 36 (2), W485-W490. ISSN 0305-1048.

Yeats, C. and Lees, J. and Reid, A. and Kellam, P. and Martin, Nigel and Liu, X. and Orengo, C.A. (2008) Gene3D: comprehensive structural and functional annotation of genomes. Nucleic Acids Research 36 (S1), D414-D418. ISSN 0305-1048.

Pearl, F.M.G. and Bennett, C.F. and Bray, J.E. and Harrison, A.P. and Martin, Nigel and Shepherd, Adrian J. and Sillitoe, I. and Thornton, Janet M. and Orengo, C.A. (2003) The CATH database: an extended protein family resource for structural and functional genomics. Nucleic Acids Research 31 (1), pp. 452-455. ISSN 0305-1048.

Tuberculosis

Coll, F. and Preston, M. and Guerra-Assuncao, J. and Hill-Cawthorne, G. and Harris, D. and Perdigao, J. and Viveiros, M. and Portugal, I. and Drobniewski, F. and Gagneux, S. and Glynn, J. and Pain, A. and Parkhill, J. and McNerney, R. and Martin, Nigel and Clark, T. (2014) PolyTB: a genomic variation map for Mycobacterium tuberculosis. Tuberculosis 94 (3), pp. 346-354. ISSN 1472-9792.