2013

Poulovassilis, Alexandra (2013) Database research challenges and opportunities of big graph data. In: Gottlob, G. and Grasso, G. and Olteanu, D. and Schallhart, C. (eds.) Big Data. Berlin, Germany: Springer Verlag, pp. 29-32. ISBN 9783642394676.

Williams, Mark A. (2013) Protein-ligand interactions: fundamentals. In: Williams, Mark A. and Daviter, Tina (eds.) Protein–Ligand Interactions: Fundamentals. Methods in Molecular Biology I 1008. Berlin, Germany: Springer, pp. 3-34. ISBN 9781627033978.

d'Avanzo, N. and McCusker, Emily C. and Powl, Andrew M. and Miles, Andrew J. and Nichols, C.G. and Wallace, Bonnie A. (2013) Differential lipid dependence of function of bacterial sodium channel homologues. Biophysical Journal 104 (2), 14a. ISSN 0006-3495.

29 January 2013

Ulmschneider, Martin B. and Bagneris, Claire and McCusker, Emily C. and Ulmschneider, J.P. and Wallace, Bonnie A. (2013) Microsecond molecular dynamics simulations of the open state structure of a bacterial voltage-gated sodium channel reveal mechanisms of ion selectivity and conduction. Biophysical Journal 104 (2), 132a-133a. ISSN 0006-3495.

March 2013

Pandurangan, A.P. and Shakeel, S. and Butcher, S. and Topf, Maya (2013) Combined approaches to flexible fitting and assessment in virus capsids undergoing conformational change. Journal of Structural Biology 185 (3), pp. 427-439. ISSN 1047-8477.

22 March 2013

Yuan, Shujun and Topf, Maya and Reubold, T.F. and Eschenburg, S. and Akey, C.W. (2013) Changes in Apaf-1 conformation that drive apoptosome assembly. Biochemistry 52 (13), pp. 2319-2327. ISSN 0006-2960.

April 2013

James, Victoria M. and Bode, A. and Chung, S.-K. and Gill, J.L. and Nielsen, M. and Cowan, Frances M. and Vujic, M. and Thomas, R.H. and Rees, M.I. and Harvey, K. and Keramidas, A. and Topf, Maya and Ginjaar, I. and Lynch, J.W. and Harvey, R.J. (2013) Novel missense mutations in the glycine receptor β subunit gene (GLRB) in startle disease. Neurobiology of Disease 52 , pp. 137-149. ISSN 0969-9961.

8 April 2013

van Veen, H.W. and d'Avanzo, N. and McCusker, Emily C. and Powl, Andrew M. and Miles, Andrew J. and Nichols, C.G. and Wallace, Bonnie A. (2013) Differential lipid dependence of the function of bacterial sodium channels. PLoS One 8 (4), e61216. ISSN 1932-6203.

16 April 2013

Ulmschneider, Martin B. and Bagneris, Claire and McCusker, Emily C. and DeCaen, P.G. and Delling, M. and Clapham, D.E. and Ulmschneider, J.P. and Wallace, Bonnie A. (2013) Molecular dynamics of ion transport through the open conformation of a bacterial voltage-gated sodium channel. Proceedings of the National Academy of Sciences of the United States of America 110 (16), pp. 6364-6369. ISSN 0027-8424.

31 May 2013

Miles, Andrew J. and Fedosova, N.U. and Hoffmann, S.V. and Wallace, Bonnie A. and Esmann, M. (2013) Stabilisation of Na,K-ATPase structure by the cardiotonic steroid ouabain. Biochemical and Biophysical Research Communications 435 (2), pp. 300-305. ISSN 0006-291X.

4 June 2013

Lopes, J.L.S. and Orcia, D. and Araujo, A.P.U. and DeMarco, R. and Wallace, Bonnie A. (2013) Folding factors and partners for the intrinsically disordered protein Micro-Exon Gene 14 (MEG-14). Biophysical Journal 104 (11), pp. 2512-2520. ISSN 0006-3495.

July 2013

Redzej, Adam and Ilangovan, Aravindan and Lang, S. and Gruber, C.J. and Topf, Maya and Zangger, K. and Zechner, E.L. and Waksman, Gabriel (2013) Structure of a translocation signal domain mediating conjugative transfer by Type IV secretion systems. Molecular Microbiology 89 (2), pp. 324-333. ISSN 0950-382X.

Woollett, Benjamin and Whitmore, Lee and Janes, R.W. and Wallace, Bonnie A. (2013) ValiDichro: a website for validating and quality control of protein circular dichroism spectra. Nucleic Acids Research 41 (W1), W417-W421. ISSN 0305-1048.

August 2013

Fernandez, D.I. and Sani, M.-A. and Miles, Andrew J. and Wallace, Bonnie A. and Separovic, F. (2013) Membrane defects enhance the interaction of antimicrobial peptides, aurein 1.2 versus caerin 1.1. Biochimica et Biophysica Acta (BBA) - Biomembranes 1828 (8), pp. 1863-1872. ISSN 0006-3002.

6 August 2013

Maurer, U.E. and Zeev-Ben-Mordehai, T. and Pandurangan, Arun and Cairns, T.M. and Hannah, B.P. and Whitbeck, J.C. and Eisenberg, R.J. and Cohen, G.H. and Topf, Maya and Huiskonen, J.T. and Grünewald, K. (2013) The structure of Herpesvirus Fusion Glycoprotein B-Bilayer Complex reveals the protein-membrane and lateral protein-protein interaction. Structure 21 (8), pp. 1396-1405. ISSN 0969-2126.

3 September 2013

Thalassinos, Konstantinos and Pandurangan, Arun and Xu, M. and Alber, F. and Topf, Maya (2013) Conformational states of macromolecular assemblies explored by integrative structure calculation. Structure 21 (9), pp. 1500-1508. ISSN 0969-2126.

19 September 2013

Bagneris, Claire and DeCaen, P.G. and Hall, B.A. and Naylor, Claire E. and Clapham, D.E. and Kay, C.W.M. and Wallace, Bonnie A. (2013) Role of the C-terminal domain in the structure and function of tetrameric sodium channels. Nature Communications 4 , p. 2465. ISSN 2041-1723.

December 2013

Ganser, L.R. and Yan, Q. and James, Victoria M. and Kozol, R. and Topf, Maya and Harvey, R.J. and Dallman, J.E. (2013) Distinct phenotypes in zebrafish models of human startle disease. Neurobiology of Disease 60 , pp. 139-151. ISSN 0969-9961.

18 December 2013

Hofmann, A. and Garcia, A.F. and Lopes, J.L.S. and Costa-Filho, A.J. and Wallace, Bonnie A. and Araujo, A.P.U. (2013) Membrane interactions of S100A12 (Calgranulin C). PLoS One 8 (12), e82555. ISSN 1932-6203.