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Bioinformatics

Shepherd, Adrian J. and Martin, Nigel and Johnson, Roger and Kellam, P. and Orengo, C.A. (2002) PFDB: a generic protein family database integrating the CATH domain structure database with sequence based protein family resources. Bioinformatics 18 (12), pp. 1666-1672. ISSN 1367-4803.

Genome Biology

Swift, S. and Tucker, A. and Vinciotti, V. and Martin, Nigel and Orengo, C.A. and Liu, X. and Kellam, P. (2004) Consensus clustering and functional interpretation of gene-expression data. Genome Biology 5 (11), ISSN 1465-6906.

Nucleic Acids Research

Cuff, A.I. and Sillitoe, I. and Lewis, T.E. and Redfern, O.C. and Garratt, R. and Thornton, Janet M. and Orengo, C.A. (2009) The CATH classification revisited-architectures reviewed and new ways to characterize structural divergence in superfamilies. Nucleic Acids Research 37 (1(S)), D310-D314. ISSN 0305-1048.

Siepen, J.A. and Belhajjame, K. and Selley, J.N. and Embury, S.M. and Paton, N.W. and Goble, C.A. and Oliver, S.G. and Stevens, R. and Zamboulis, Lucas and Martin, Nigel and Poulovassilis, Alexandra and Jones, P. and Côté, R. and Hermjakob, H. and Pentony, M.M. and Jones, D.T. and Orengo, C.A. and Hubbard, S.J. (2008) ISPIDER Central: an integrated database web-server for proteomics. Nucleic Acids Research 36 (2), W485-W490. ISSN 0305-1048.

Yeats, C. and Lees, J. and Reid, A. and Kellam, P. and Martin, Nigel and Liu, X. and Orengo, C.A. (2008) Gene3D: comprehensive structural and functional annotation of genomes. Nucleic Acids Research 36 (S1), D414-D418. ISSN 0305-1048.

Pearl, F.M.G. and Bennett, C.F. and Bray, J.E. and Harrison, A.P. and Martin, Nigel and Shepherd, Adrian J. and Sillitoe, I. and Thornton, Janet M. and Orengo, C.A. (2003) The CATH database: an extended protein family resource for structural and functional genomics. Nucleic Acids Research 31 (1), pp. 452-455. ISSN 0305-1048.

Proceedings of the National Academy of Sciences of the United States of America

Studer, R. A. and Christin, P.-A. and Williams, Mark A. and Orengo, C.A. (2014) Stability-activity tradeoffs constrain the adaptive evolution of RubisCO. Proceedings of the National Academy of Sciences of the United States of America 111 (6), pp. 2223-2228. ISSN 0027-8424.

Scientific Reports

Scholes, H.M. and Cryar, A. and Kerr, F. and Sutherland, D. and Gethings, L.A. and Vissers, J.P.C. and Lees, J.G. and Orengo, C.A. and Partridge, L. and Thalassinos, Kostas (2020) Dynamic changes in the brain protein interaction network correlates with progression of Aβ42 pathology in Drosophila. Scientific Reports 10 (1), ISSN 2045-2322.

Structure

Cuff, A.I. and Redfern, O.C. and Greene, L. and Sillitoe, I. and Lewis, T.E. and Dibley, M. and Reid, A. and Pearl, F.G.M. and Dallman, T. and Todd, A. and Garratt, R. and Thornton, Janet M. and Orengo, C.A. (2009) The CATH hierarchy revisited - structural divergence in domain superfamilies and the continuity of fold space. Structure 17 (8), pp. 1051-1062. ISSN 0969-2126.