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Rafi, Abdul Muntakim and Nogina, D. and Penzar, D. and Lee, D. and Lee, D. and Kim, N. and Kim, S. and Kim, D. and Shin, Y. and Kwak, I.-Y. and Meshcheryakov, G. and Lando, A. and Zinkevich, A. and Kim, B.-C. and Lee, J. and Kang, T. and Vaishnav, E.D. and Yadollahpour, P. and Bornelöv, S. and Svensson, F. and Trapotsi, M.-A. and Tran, D. and Nguyen, T. and Tu, X. and Zhang, W. and Qiu, W. and Ghotra, R. and Yu, Y. and Labelson, E. and Prakash, A. and Narayanan, A. and Koo, P. and Chen, X. and Jones, D.T. and Tinti, M. and Guan, Y. and Ding, M. and Chen, K. and Yang, Y. and Ding, K. and Dixit, G. and Wen, J. and Zhou, Z. and Dutta, P. and Sathian, R. and Surana, P. and Ji, Y. and Liu, H. and Davuluri, R.V. and Hiratsuka, Y. and Takatsu, M. and Chen, T.-M. and Huang, C.-H. and Wang, H.-K. and Shih, E.S.C. and Chen, S.-H. and Wu, C.-H. and Chen, J.-Y. and Huang, K.-L. and Alsaggaf, I. and Greaves, P. and Barton, Carl and Wan, Cen and Abad, N. and Körner, C. and Feuerbach, L. and Brors, B. and Li, Y. and Röner, S. and Dash, P.M. and Schubach, M. and Soylemez, O. and Møller, A. and Kavaliauskaite, G. and Madsen, J. and Lu, Z. and Queen, O. and Babjac, A. and Emrich, S. and Kardamiliotis, K. and Kyriakidis, K. and Malousi, A. and Palaniappan, A. and Gupta, K. and Kumar S, P. and Bradford, J. and Perrin, D. and Salomone, R. and Schmitz, C. and JiaXing, C. and JingZhe, W. and AiWei, Y. and Kim, S. and Albrecht, J. and Regev, A. and Gong, W. and Kulakovskiy, I.V. and Meyer, P. and de Boer, C.G. (2024) A community effort to optimize sequence-based deep learning models of gene regulation. Nature Biotechnology , ISSN 1087-0156.

Akter, S. and Oliveira, J.Iv.N. and Barton, Carl and Sarkar, M.H. and Shahab, M. and Banu, T.A. and Goswami, B. and Osman, E. and Uzzaman, M.S. and Nafisa, T. and Molla, M.A. and Yeasmin, M. and Farzana, M. and Habib, A. and Shaikh, A.A. and Khan, S. (2023) Spike protein mutations and structural insights of pangolin lineage B.1.1.25 with implications for viral pathogenicity and ACE2 binding affinity. Scientific Reports 13 (1), ISSN 2045-2322.

Carl, Barton (2022) On the average-case complexity of pattern matching with wildcards. Theoretical Computer Science 922 , pp. 37-45. ISSN 0304-3975.

Leger, A. and Brettell, I. and Monahan, J. and Barton, Carl and Wolf, N. and Kusminski, N. and Herder, C. and Aadepu, N. and Becker, C. and Gierten, J. and Hammouda, O. and Hasel, E. and Lischik, C. and Lust, K. and Sokolova, N. and Suzuki, R. and Tavhelidse, T. and Thumberger, T. and Tsingos, E. and Watson, P. and Welz, B. and Naruse, K. and Loosli, F. and Wittbrodt, J. and Birney, E. and Fitzgerald, T.W. (2022) Genomic variations and epigenomic landscape of the Medaka Inbred Kiyosu-Karlsruhe (MIKK) panel. Genome Biology , ISSN 1465-6906.

Fitzgerald, T. and Brettell, I. and Leger, A. and Wolf, N. and Kusminski, N. and Monahan, J. and Barton, Carl and Herder, C. and Aadepu, N. and Gierten, J. and Becker, C. and Hammouda, O.T. and Hasel, E. and Lischik, C. and Lust, K. and Sokolova, N. and Suzuki, R. and Tsingos, E. and Tavhelidse, T. and Thumberger, T. and Watson, P. and Welz, B. and Khouja, N. and Naruse, K. and Birney, E. and Wittbrodt, J. and Loosli, F. (2022) The Medaka Inbred Kiyosu-Karlsruhe (MIKK) panel. Genome Biology , ISSN 1474-7596.

Khan, S. and Akter, S. and Goswami, B. and Ahashan, H. and Banu, T. and Barton, Carl and Osman, E. and Samir, S. and Arjuman, F. and Hasan, S. and Hossain, M. (2021) Whole genome mapping and identification of single nucleotide polymorphisms of four Bangladeshi individuals and their functional significance. BMC Research Notes 14 (105), ISSN 1756-0500.

Conference or Workshop Item

Wan, Cen and Barton, Carl (2024) A novel hierarchy-based knowledge discovery framework for elucidating human aging-related phenotypic abnormalities. In: SAC '24 - 39th ACM/SIGAPP Symposium on Applied Computing, 08-12 Apr 2024, Avila, Spain.