Browse by Research Centre

A

Abdul-Gader, Ali and Miles, Andrew J. and Wallace, Bonnie A. (2011) A reference dataset for the analyses of membrane protein secondary structures and transmembrane residuesusing circular dichroism spectroscopy. Bioinformatics 27 (12), pp. 1630-1636. ISSN 1367-4803.

Aramayo, Ricardo and Sherman, M.B. and Brownless, K. and Lurz, R. and Okorokov, A.L. and Orlova, Elena (2011) Quaternary structure of the specific p53-DNA complex reveals the mechanism of p53 mutant dominance. Nucleic Acids Research 39 (20), pp. 8960-8971. ISSN 0305-1048.

B

Bagneris, Claire and Briggs, Louise C. and Savva, Renos and Ebrahimi, B. and Barrett, Tracey E. (2011) Crystal structure of a KSHV-SOX-DNA complex: insights into the molecular mechanisms underlying DNase activity and host shutoff. Nucleic Acids Research 39 (13), pp. 5744-5756. ISSN 0305-1048.

Baker, S. and Nicklin, Jane and Griffiths, C. (2011) BIOS instant notes in microbiology (4th Edition). New York, USA: Garland Science. ISBN 9780415607704.

Banta, L.M. and Kerr, J.E. and Cascales, E. and Giuliano, M.E. and Bailey, M.E. and McKay, C. and Chandran, Vidya and Waksman, Gabriel and Christie, P.J. (2011) An Agrobacterium VirB10 Mutation Conferring a Type IV Secretion System Gating Defect. Journal of Bacteriology 193 (10), pp. 2566-2574. ISSN 0021-9193.

Beck, M. and Topf, Maya and Frazier, Z. and Tjong, H. and Xu, M. and Zhang, S.H. and Alber, F. (2011) Exploring the spatial and temporal organization of a cell's proteome. Journal of Structural Biology 173 (3), pp. 483-496. ISSN 1047-8477.

Behnke-Parks, W.M. and Vendome, J. and Honig, B. and Maliga, Z. and Moores, Carolyn A. and Rosenfeld, S.S. (2011) Loop L5 acts as a conformational latch in the Mitotic Kinesin Eg5. Journal of Biological Chemistry 286 (7), pp. 5242-5253. ISSN 0021-9258.

Beich Frandsen, M. and Vecerek, B. and Konarev, P.V. and Sjoblom, B. and Kloiber, K. and Hammerle, H. and Rajkowitsch, L. and Miles, Andrew J. and Kontaxis, G. and Wallace, Bonnie A. and Svergun, D.I. and Konrat, R. and Blasi, U. and Djinovic Carugo, K. (2011) Structural insights into the dynamics and function of the C-terminus of the E. coli RNA chaperone Hfq. Nucleic Acids Research 39 (11), pp. 4900-4915. ISSN 0305-1048.

Blombach, F. and Launay, H. and Zorraquino, V. and Swarts, D.C. and Cabrita, L.D. and Benelli, D. and Christodoulou, John and Londei, P. and van der Oost, J. (2011) An HflX-type GTPase from Sulfolobus solfataricus binds to the 50S ribosomal subunit in all nucleotide-bound states. Journal of Bacteriology 193 (11), pp. 2861-2867. ISSN 0021-9193.

Box, M.S. and Dodsworth, Steven and Rudall, P.J. and Bateman, R.M. and Glover, B.J. (2011) Characterization of Linaria KNOX genes suggests a role in petal-spur development. Plant Journal 68 (4), pp. 703-714. ISSN 0960-7412.

Boëda, B. and Knowles, P.P. and Briggs, David C. and Murray-Rust, J. and Soriano, E. and Garvalov, B.K. and McDonald, Neil Q. and Way, M. (2011) Molecular recognition of the tes LIM2–3 domains by the actin-related protein arp7A. Journal of Biological Chemistry 286 (13), pp. 11543-11554. ISSN 0021-9258.

Briggs, David C. and Naylor, Claire E. and Smedley, J.G. and Lukoyanova, Natalya and Robertson, S. and Moss, David S. and McClane, B.A. and Basak, Ajit K. (2011) Structure of the food-poisoning Clostridium perfringens enterotoxin reveals similarity to the aerolysin-like pore-forming toxins. Journal of Molecular Biology 413 (1), pp. 138-149. ISSN 0022-2836.

Brinkworth, A.J. and Malcolm, D.S. and Pedrosa, A.T. and Roguska, K. and Shahbazian, S. and Graham, J.E. and Hayward, Richard D. and Carabeo, R.A. (2011) Chlamydia trachomatis Slc1 is a type III secretion chaperone that enhances the translocation of its invasion effector substrate TARP. Molecular Microbiology 82 (1), pp. 131-144. ISSN 0950-382X.

C

Cai, X. and Wang, R. and Filloux, A. and Waksman, Gabriel and Meng, G.Y. (2011) Structural and functional characterization of Pseudomonas aeruginosa CupB chaperones. PLoS One 6 (1), ISSN 1932-6203.

Chang, Y.-P. and Mahadeva, R. and Patschull, A.O.M. and Nobeli, Irene and Ekeowa, U.I. and McKay, A.R. and Thalassinos, Konstantinos and Irving, J.A. and Haq, I. and Nyon, Mun Peak and Christodoulou, John and Ordóñez, A. and Miranda, E. and Gooptu, Bibek (2011) Targeting serpins in high-throughput and structure-based drug design. In: Whisstock, J.C. and Bird, P.I. (eds.) Serpin Structure and Evolution. Methods In Enzymology 501. New York, U.S.: Elsevier, pp. 139-175. ISBN 9780123859501.

Charalambous, Kalypso and Wallace, Bonnie A. (2011) NaChBac: the long lost sodium channel ancestor. Biochemistry 50 (32), pp. 6742-6752. ISSN 0006-2960.

Chudasama, V. and Smith, M.E.B. and Schumacher, F.F. and Papaioannou, D. and Waksman, Gabriel and Baker, J.R. and Caddick, S. (2011) Bromopyridazinedione-mediated protein and peptide bioconjugation. Chemical Communications 47 (31), pp. 8781-8783. ISSN 1359-7345.

Clark, Alice R. and Naylor, Claire E. and Bagneris, Claire and Keep, Nicholas H. and Slingsby, Christine (2011) Crystal structure of R120G disease mutant of human αB-Crystallin Domain Dimer shows closure of a groove. Journal of Molecular Biology 408 (1), pp. 118-134. ISSN 0022-2836.

D

Durand, E. and Waksman, Gabriel and Receveur-Brechot, V. (2011) Structural insights into the membrane-extracted dimeric form of the ATPase TraB from the Escherichia coli pKM101 conjugation system. BMC Structural Biology 11 (4), ISSN 1472-6807.

da Fonsceca, P.C.A. and Kong, E.H. and Zhang, Z. and Schreiber, A. and Williams, Mark A. and Morris, E.P. and Barford, D. (2011) Structures of APC/C-CDH1 with substrates identify Cdh1 and Apc10 as the D-box co-receptor. Nature 470 , pp. 274-278. ISSN 0028-0836.

E

Edwards, M.J. and Williams, Mark A. and Maxwell, A. and McKay, A.R. (2011) Mass spectrometry reveals that the antibiotic simocyclinone D8 binds to DNA gyrase in a "bent-over" conformation: evidence for positive cooperativity in binding. Biochemistry 50 (17), pp. 3432-3440. ISSN 0006-2960.

Evangelopoulos, Dimitrios and Cronin, Nora and Daviter, Tina and Sim, E. and Keep, Nicholas H. and Bhakta, Sanjib (2011) Characterization of an oxidoreductase from the arylamine N-acetyltransferase operon in Mycobacterium Smegmatis. FEBS Journal 278 (24), pp. 4824-4832. ISSN 1742-464X.

F

Favia, A.D. and Nobeli, Irene (2011) Using chemical structure to infer biological function. In: Guha, R. and Bender, A. (eds.) Computational Approaches in Cheminformatics and Bioinformatics. Hoboken, U.S.: Wiley, pp. 211-238. ISBN 9780470384411.

Fourniol, Franck J. and Moores, Carolyn A. (2011) Snapshots of kinesin motors on microtubule tracks. Methods in Molecular Biology 778 , pp. 57-70. ISSN 1064-3745.

Freir, D.B. and Nicoll, A.J. and Klyubin, I. and Panico, Silvia and McDonald, J.M. and Risse, E. and Asante, E.A. and Farrow, M.A. and Sessions, R.B. and Saibil, Helen R. and Clarke, A.R. and Rowan, M.J. and Walsh, D.M. and Collinge, J. (2011) Interaction between prion protein and toxic amyloid β assemblies can be therapeutically targeted at multiple sites. Nature Communications 2 , ISSN 2041-1723.

G

Geibel, Sebastien and Waksman, Gabriel (2011) Crystallography and electron microscopy of chaperone/usher pilus systems. Advances In Experimental Medicine & Biology 715 , pp. 159-174. ISSN 0065-2598.

Gooptu, Bibek and Lomas, David A. (2011) The structural biology of α1-antitrypsin deficiency and the serpinopathies. In: Tschesche, H. (ed.) Methods in Protein Biochemistry. Berlin, Germany: DeGruyter, pp. 325-344. ISBN 9783110252361.

Guzman, Juan D. and Wube, A. and Evangelopoulos, Dimitrios and Gupta, Antima and Hufner, A. and Basavannacharya, Chandrakala and Rahman, M.M. and Thomaschitz, C. and Bauer, R. and McHugh, T.D. and Nobeli, Irene and Prieto, J.M. and Gibbons, S. and Bucar, F. and Bhakta, Sanjib (2011) Interaction of N-methyl-2-alkenyl-4-quinolones with ATP-dependent MurE ligase of Mycobacterium tuberculosis: antibacterial activity, molecular docking and inhibition kinetics. Journal of Antimicrobial Chemotherapy 66 (8), pp. 1766-1772. ISSN 0305-7453.

H

Harvey, D.J. and Sobott, F. and Crispin, M. and Wrobel, A. and Bonomelli, C. and Vasiljevic, S. and Scanlan, C.N. and Scarff, C.A. and Thalassinos, Konstantinos and Scrivens, J.H. (2011) Ion mobility mass spectrometry for extracting spectra of N-glycans directly from incubation mixtures following glycan release: application to glycans from engineered glycoforms of intact, folded HIV gp120. Journal of The American Society for Mass Spectrometry 22 (3), pp. 568-581. ISSN 1044-0305.

Henderson, B. and Nair, S.P. and Pallas, J. and Williams, Mark A. (2011) Fibronectin: a multidomain host adhesin targeted by bacterial fibronectin-binding proteins. FEMS Microbiology Reviews 35 (1), pp. 147-200. ISSN 1574-6976.

I

Irving, J.A. and Ekeowa, U.I. and Belorgey, D. and Haq, I. and Gooptu, Bibek and Miranda, E. and Pérez, J. and Roussel, B.D. and Ordóñez, A. and Dalton, L.E. and Thomas, S.E. and Marciniak, S.J. and Parfrey, H. and Chilvers, E.R. and Teckman, J.H. and Alam, S. and Mahadeva, R. and Rashid, S.T. and Vallier, L. and Lomas, D.A. (2011) The serpinopathies: studying serpin polymerization in vivo. In: Whisstock, J.C. and Bird, P. I. (eds.) Serpin Structure and Evolution. Methods In Enzymology 501. New York, U.S.: Elsevier, pp. 421-466. ISBN 9780123859501.

J

Jiaa, H. and Korolev, S. and Niedziela-Majkaa, A. and Malufa, N.K. and Gaussa, G.H. and Myongf, S. and Hag, T. and Waksman, Gabriel and Lohman, T.M. (2011) Rotations of the 2B sub-domain of E. coli UvrD helicase/translocase coupled to nucleotide and DNA binding. Journal of Molecular Biology 411 (3), pp. 633-648. ISSN 0022-2836.

L

Lees, William D. and Moss, David S. and Shepherd, Adrian J. (2011) Analysis of antigenically important residues in human influenza A virus in terms of B-cell epitopes. Journal of Virology 85 (17), pp. 8548-8555. ISSN 0022-538X.

Lemaître, G. and Stella, A. and Feteira, J. and Baldeschi, C. and Vaigot, P. and Martin, M.T. and Monsarrat, B. and Waksman, Gabriel (2011) CD98hc (SLC3A2) is a key regulator of keratinocyte adhesion. Journal of Dermatological Science 61 (3), pp. 169-179. ISSN 0923-1811.

Leney, A.C. and Phan, Gilles and Allen, William J. and Verger, Denis and Waksman, Gabriel and Radford, S.E. and Ashcroft, A.E. (2011) Second order rate constants of donor-strand exchange reveal individual amino acid residues important in determining the subunit specificity of Pilus Biogenesis. Journal of The American Society for Mass Spectrometry 22 (7), pp. 1214-1223. ISSN 1044-0305.

M

Maclagan, K. and Tommasi, R. and Laurine, E. and Prodromou, C. and Driscoll, P.C. and Pearl, L.H. and Reich, S. and Savva, Renos (2011) A combinatorial method to enable detailed investigation of protein-protein interactions. Future Medicinal Chemistry 3 (3), pp. 271-282. ISSN 1756-8919.

McCusker, Emily C. and d'Avanzo, N. and Nichols, C.G. and Wallace, Bonnie A. (2011) Simplified bacterial “pore” channel provides insight into the assembly, stability and structure of sodium channels. Journal of Biological Chemistry 286 (18), pp. 16386-16391. ISSN 0021-9258.

Melo, I.S. and Moretini, A. and Cassiolato, A.M.R. and Nicklin, Jane (2011) Development of mutants of Coniothyrium Minitans with improved efficiency for control of Sclerotinia Sclerotiorum. Journal of Plant Protection Research 51 (2), pp. 179-183. ISSN 1427-4345.

Meng, G. and Spahich, N. and Kenjale, R. and Waksman, Gabriel and St Geme, J.W. (2011) Crystal structure of the haemophilus influenzae hap adhesin reveals an intercellular oligomerization mechanism for bacterial aggregation. The EMBO Journal 30 (18), pp. 3663-3874. ISSN 0261-4189.

Milanesi, Lilia and Hunter, C.A. and Tzokova, N. and Waltho, J.P. and Tomas, Salvador (2011) Versatile low-molecular-weight hydrogelators: achieving multiresponsiveness through a modular design. Chemistry: A European Journal 17 (35), pp. 9753-9761. ISSN 0947-6539.

Miles, Andrew J. and Wallace, Bonnie A. and Esmann, M. (2011) Correlation of structural and functional thermal stability of the integral membrane protein Na,K-ATPase. Biochimica et Biophysica Acta (BBA) - Biomembranes 1808 (10), pp. 2573-2580. ISSN 0006-3002.

Mirkin, Boris (2011) Choosing the number of clusters. Wiley Interdisciplinary Reviews: Data Mining and Knowledge Discovery 1 (3), pp. 252-260. ISSN 1942-4787.

Mirkin, Boris and Gutman, P.O. (2011) Adaptive following of perturbed plants with input and state delays. In: UNSPECIFIED (ed.) IEEE International Conference on Control and Automation. New York, USA: Institute of Electrical and Electronics Engineers, pp. 865-870. ISBN 9781457714757.

Mirkin, Boris and Kramarenko, A.V. (2011) Approximate bicluster and tricluster boxes in the analysis of binary data. In: Kuznetsov, S.O. and Ślęzak, D. and Hepting, D.H. and Mirkin, Boris (eds.) Rough Sets, Fuzzy Sets, Data Mining and Granular Computing. Berlin, Germany: Springer Verlag, pp. 248-256. ISBN 9783642218811.

Mirkin, Boris and Nascimento, S. (2011) Developing additive spectral approach to fuzzy clustering. In: Kuznetsov, S.O. and Ślęzak, D. and Hepting, D.H. and Mirkin, Boris (eds.) Rough Sets, Fuzzy Sets, Data Mining and Granular Computing. Lecture Notes in Computer Science 6743. Berlin, Germany: Springer Verlag, pp. 273-277. ISBN 9783642218804.

Mirkin, Boris and Nascimento, S. and Fenner, Trevor and Felizardo, R. (2011) How to visualize a crisp or fuzzy topic set over a taxonomy. In: Kuznetsov, S.O. and Mandal, D.P. and Kundu, M.K. and Pal, S.K (eds.) Pattern Recognition and Machine Intelligence. Lecture Notes in Computer Science 6744 6744. Berlin, Germany: Springer Verlag, pp. 3-12. ISBN 9783642217869.

Mollapour, M. and Tsutsumi, T. and Truman, A.W. and Xu, W. and Vaughan, Cara K. and Beebe, K. and Konstantinova, A. and Vourganti, S. and Panaretou, B. and Piper, P.W. and Trepel, J.B. and Prodromou, C. and Pearl, L.H. and Neckers, L. (2011) Threonine 22 Phosphorylation attenuates Hsp90 interaction with Cochaperones and affects its chaperone activity. Molecular Cell 41 (6), pp. 672-681. ISSN 1097-2765.

Moore, B. and Miles, Andrew J. and Guerra-Giraldez, C. and Simpson, P. and Iwata, M. and Wallace, Bonnie A. and Matthews, S.J. and Smith, D.F. and Brown, K.A. (2011) Structural basis of molecular recognition of the Leishmania Small Hydrophilic Endoplasmic Reticulum-associated Protein (SHERP) at membrane surfaces. Journal of Biological Chemistry 286 (11), pp. 9246-9256. ISSN 0021-9258.

Moores, Carolyn A. and Peters, Carsten and Brejc, K. and Belmont, L. and Bodey, Andrew J. and Lee, Y. and Yu, M. and Guo, J. and Sakowicz, R. and Hartman, J. (2011) Small loops make a big difference: insight into the molecular mechanism of the multi-tasking Kinesin-8 Motor. Biophysical Journal 100 (3), 3a-3a. ISSN 0006-3495.

Mouilleron, S. and Langer, C.A. and Guettler, S. and McDonald, Neil Q. and Treisman, R. (2011) Structure of a pentavalent G-Actin*MRTF-A complex reveals how G-Actin controls nucleocytoplasmic shuttling of a transcriptional coactivator. Science Signaling 4 (177), ra40. ISSN 1945-0877.

N

Nascimento, S. and Felizardo, R. and Mirkin, Boris (2011) Thematic fuzzy clusters with an additive spectral approach. In: Antunes, L. and Pinto, S.H. (eds.) Progress in Artificial Intelligence. Berlin, Germany: Springer Verlag, pp. 446-461. ISBN 9783642247682.

O

Olsson, T.S.G. and Pitt, W.R. and Ladbury, J.E. and Williams, Mark A. (2011) The extent of enthalpy-entropy compensation in protein-ligand interactions. Protein Science 20 (9), pp. 1607-1618. ISSN 0961-8368.

Orlova, Elena and Saibil, Helen R. (2011) Structural analysis of macromolecular assemblies by electron microscopy. Chemical Reviews 111 (12), pp. 7710-7748. ISSN 0009-2665.

Osman, Khadijo and Evangelopoulos, Dimitrios and Basavannacharya, Chandrakala and Gupta, Antima and McHugh, T.D. and Bhakta, Sanjib and Gibbons, S. (2011) An antibacterial from Hypericum acmosepalum inhibits ATP-dependent MurE ligase from Mycobacterium tuberculosis. International Journal of Antimicrobial Agents 39 (2), pp. 124-129. ISSN 0924-8579.

O’Brien, E.P. and Christodoulou, John and Vendruscolo, M. and Dobson, C.M. (2011) New scenarios of protein folding can occur on the Ribosome. Journal of the American Chemical Society 133 (3), pp. 513-526. ISSN 0002-7863.

P

Patschull, Anathe O.M. and Segu, Lakshmi and Nyon, Mun Peak and Lomas, D.A. and Nobeli, Irene and Barrett, Tracey E. and Gooptu, Bibek (2011) Therapeutic target-site variability in α1-antitrypsin characterized at high resolution. Acta Crystallographica Section F Structural Biology and Crystallization Communications 67 (12), pp. 1492-1497. ISSN 1744-3091.

Phan, Gilles and Remaut, Han and Wang, T. and Allen, William J. and Pirker, Katharina F. and Lebedev, A. and Henderson, N.S. and Geibel, Sebastien and Volkan, E. and Yan, Jun and Kunze, M.B.A. and Pinkner, J.S. and Ford, B. and Kay, Christopher W.M. and Li, H.L. and Hultgren, S.J. and Thanassi, D.G. and Waksman, Gabriel (2011) Crystal structure of the FimD usher bound to its cognate FimC-FimH substrate. Nature 474 (7349), pp. 49-53. ISSN 0028-0836.

Platzer, G. and Schedlbauer, A. and Chemelli, A. and Ozdowy, P. and Coudevylle, N. and Auer, R. and Kontaxis, G. and Hartl, M. and Miles, Andrew J. and Wallace, Bonnie A. and Glatter, O. and Bister, K. and Konrat, R. (2011) The metastasis-associated extracellular matrix protein Osteopontin forms transient structure in ligand interaction sites. Biochemistry 50 (27), pp. 6113-6124. ISSN 0006-2960.

Prohens, R. and Portell, A. and Puigjaner, C. and Tomas, Salvador and Fujii, K. and Harris, K.D.M. and Alcobé, X. and Font-Bardia, M. and Barbas, R. (2011) Cooperativity in Solid-State Squaramides. Crystal Growth & Design 11 (9), pp. 3725-3730. ISSN 1528-7483.

R

Reinhold, H. and Soyk, S. and Simkova, K. and Hostettler, C. and Marafino, J. and Mainiero, S. and Vaughan, Cara K. and Monroe, J.D. and Zeeman, S.C. (2011) beta-Amylase-like proteins function as transcription factors in Arabidopsis, controlling shoot growth and development. Plant Cell 23 (4), pp. 1391-1403. ISSN 1040-4651.

Ryan, C.P. and Smith, M.E.B. and Schumacher, F.F. and Grohmann, D. and Papaioannou, D. and Waksman, Gabriel and Werner, F. and Baker, J.R. and Caddick, S. (2011) Tunable reagents for multi-functional bioconjugation: reversible or permanent chemical modification of proteins and peptides by control of maleimide hydrolysis. Chemical Communications 47 (19), pp. 5452-5454. ISSN 1359-7345.

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Shimizu, A. and Baratchian, M. and Takeuchi, Y. and Escors, D. and MacDonald, D. and Barrett, Tracey E. and Bagneris, Claire and Collins, M. and Noursadeghi, M. (2011) Kaposi's Sarcoma-Associated Herpesvirus vFLIP and Human T Cell Lymphotropic Virus Type 1 Tax Oncogenic Proteins Activate I B Kinase Subunit   by Different Mechanisms Independent of the Physiological Cytokine-Induced Pathways. Journal of Virology 85 (14), pp. 7444-7448. ISSN 0022-538X.

St. Quinton, Jacqueline M. and Fay, M.F. and Ingrouille, Martin J. and Nicklin, Jane (2011) Characterisation ofRubus niveus: a prerequisite to its biological control in oceanic islands. Biocontrol Science and Technology 21 (6), pp. 733-752. ISSN 0958-3157.

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Tavares, P. and Zinn-Justin, S. and Orlova, Elena (2011) Genome gating in tailed bacteriophage capsids. In: Rossmann, M.G. and Rao, V.B. (eds.) Viral Molecular Machines. Advances in Experimental Medicine and Biology 726 726. New York, U.S.: Springer, pp. 585-600. ISBN 9781461409809.

Taylor, D.M. and Balabadra, U. and Xiang, Z. and Woodman, B. and Meade, S. and Amore, A. and Maxwell, M.M. and Reeves, S. and Bates, G.P. and Luthi-Carter, R. and Lowden, Philip A.S. and Kazantsev, A.G. (2011) A brain-permeable small molecule reduces neuronal cholesterol by inhibiting activity of Sirtuin 2 Deacetylase. ACS Chemical Biology 6 (6), pp. 540-546. ISSN 1554-8929.

Terradot, L. and Waksman, Gabriel (2011) Architecture of the Helicobacter pylori Cag-type IV secretion system. FEBS Journal 278 (8), pp. 1213-22. ISSN 1742-464X.

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Van Gerven, N. and Waksman, Gabriel and Remaut, H. (2011) Pili and flagella biology, structure, and biotechnological applications. Progress in Molecular Biology and Translational Science 103 , pp. 21-72. ISSN 1877-1173.

Vasishtan, Daven and Topf, Maya (2011) Scoring functions for cryoEM density fitting. Journal of Structural Biology 174 (2), pp. 333-343. ISSN 1047-8477.

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Wallace, Bonnie A. and Gekko, K. and Vrønning Hoffmann, S. and Lin, Y.H. and Sutherland, J.C. and Tao, Y. and Wien, F. and Janes, R.W. (2011) Synchrotron radiation circular dichroism (SRCD) spectroscopy: An emerging method in structural biology for examining protein conformations and protein interactions. Nuclear Instruments and Methods in Physics Research Section A: Accelerators, Spectrometers, Detectors and Associated Equipment 649 (1), pp. 177-178. ISSN 0168-9002.

Waudby, Christopher A. and Christodoulou, John (2011) GPU accelerated Monte Carlo simulation of pulsed-field gradient NMR experiments. Journal of Magnetic Resonance 211 (1), pp. 67-73. ISSN 1090-7807.

Whitfield, T. and Miles, Andrew J. and Scheinost, J.C. and Offer, J. and Wentworth, P. and Dwek, R.A. and Wallace, Bonnie A. and Biggin, P.C. and Zitzmann, N. (2011) The influence of different lipid environments on the structure and function of the hepatitis C virus p7 ion channel protein. Molecular Membrane Biology 28 (5), pp. 254-264. ISSN 0968-7688.

Whitmore, Lee and Woollett, Benjamin and Miles, Andrew J. and Klose, D.P. and Janes, R.W. and Wallace, Bonnie A. (2011) PCDDB: the Protein Circular Dichroism Data Bank, a repository for circular dichroism spectral and metadata. Nucleic Acids Research 39 (1), D480-D486. ISSN 0305-1048.

Whitmore, Lee and Woollett, Benjamin and Miles, Andrew J. and Klose, D.P. and Janes, R.W. and Wallace, Bonnie A. (2011) PCDDB: the protein circular dichroism data bank, a repository for circular dichroism spectral and metadata. Nucleic Acids Research 39 (S1), D480-D486. ISSN 0305-1048.

Wilson, M. and Wei, C. and Bjelkmar, P. and Wallace, Bonnie A. and Pohorille, A. (2011) Molecular dynamics simulation of the antiamoebin ion channel: linking structure and conductance. Biophysical Journal 100 (10), pp. 2394-2402. ISSN 0006-3495.

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Yuan, Shujun and Yu, Xinchao and Topf, Maya and Dorstyn, Loretta and Kumar, Sharad and Ludtke, Steven J. and Akey, C.W. (2011) Structure of the Drosophila Apoptosome at 6.9 Å Resolution. Structure 19 (1), pp. 128-140. ISSN 09692126.